Imaging and Biomedical Engineering

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  • 2019

    Automatic brain tumor segmentation using convolutional neural networks with test-time augmentation

    Wang, G., Li, W., Ourselin, S. & Vercauteren, T., 26 Jan 2019, (E-pub ahead of print) Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 4th International Workshop, BrainLes 2018, Held in Conjunction with MICCAI 2018, Revised Selected Papers. Reyes, M., Bakas, S., Crimi, A., van Walsum, T., Kuijf, H. & Keyvan, F. (eds.). Springer Verlag, p. 61-72 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11384 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    Open Access
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    62 Citations (Scopus)
    100 Downloads (Pure)

  • Privacy-Preserving Federated Brain Tumour Segmentation

    Li, W., Milletarì, F., Xu, D., Rieke, N., Hancox, J., Zhu, W., Baust, M., Cheng, Y., Ourselin, S., Cardoso, M. J. & Feng, A., 1 Jan 2019, Machine Learning in Medical Imaging - 10th International Workshop, MLMI 2019, Held in Conjunction with MICCAI 2019, Proceedings. Suk, H.-I., Liu, M., Lian, C. & Yan, P. (eds.). SPRINGER, p. 133-141 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11861 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    291 Citations (Scopus)
  • 2018

    Automatic Brain Tumor Segmentation Using Cascaded Anisotropic Convolutional Neural Networks

    Wang, G., Li, W., Ourselin, S. & Vercauteren, T., 17 Feb 2018, (E-pub ahead of print) Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 3rd International Workshop, BrainLes 2017, Held in Conjunction with MICCAI 2017, Revised Selected Papers. Springer Verlag, Vol. 10670 LNCS. p. 178-190 13 p. Chapter 16. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10670 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    241 Citations (Scopus)

  • Deep Convolutional Filtering for Spatio-Temporal Denoising and Artifact Removal in Arterial Spin Labelling MRI

    Owen, D., Melbourne, A., Eaton-Rosen, Z., Thomas, D. L., Marlow, N., Rohrer, J. & Ourselin, S., 2018, MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2018, PT I. Vol. 11070. p. 21-29 9 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    12 Citations (Scopus)

  • Generalised wasserstein dice score for imbalanced multi-class segmentation using holistic convolutional networks

    Fidon, L., Li, W., Garcia-peraza-herrera, L. C., Ekanayake, J., Kitchen, N., Ourselin, S. & Vercauteren, T., 17 Feb 2018, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 3rd International Workshop, BrainLes 2017, Held in Conjunction with MICCAI 2017, Revised Selected Papers. Springer Verlag, Vol. 10670 LNCS. p. 64-76 13 p. Chapter 6. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10670 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    52 Citations (Scopus)

  • Label-driven weakly-supervised learning for multimodal deformable image registration

    Hu, Y., Modat, M., Gibson, E., Ghavami, N., Bonmati, E., Moore, C. M., Emberton, M., Noble, J. A., Barratt, D. C. & Vercauteren, T., 24 May 2018, (E-pub ahead of print) 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 1070-1074 5 p.

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    Open Access
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    135 Citations (Scopus)
    532 Downloads (Pure)
  • 2017

    On the compactness, efficiency, and representation of 3D convolutional networks: Brain parcellation as a pretext task

    Li, W., Wang, G., Fidon, L., Ourselin, S., Cardoso, M. J. & Vercauteren, T., 1 Jan 2017, Information Processing in Medical Imaging - 25th International Conference, IPMI 2017, Proceedings. Springer Verlag, Vol. 10265 LNCS. p. 348-360 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10265 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    260 Citations (Scopus)
  • 2015

    Interventional photoacoustic imaging of the human placenta with ultrasonic tracking for minimally invasive fetal surgeries

    Xia, W., Maneas, E., Nikitichev, D. I., Mosse, C. A., Dos Santos, G. S., Vercauteren, T., David, A. L., Deprest, J., Ourselin, S., Beard, P. C. & Desjardins, A. E., 18 Nov 2015, (E-pub ahead of print) Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Springer Verlag, Vol. 9349. p. 371-378 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9349).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    44 Citations (Scopus)

  • Robust CT synthesis for radiotherapy planning: Application to the head and neck region

    Burgos, N., Cardoso, M. J., Guerreiro, F., Veiga, C., Modat, M., McClelland, J., Knopf, A. C., Punwani, S., Atkinson, D., Arridge, S. R., Hutton, B. F. & Ourselin, S., 1 Jan 2015, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference, Proceedings. Springer Verlag, Vol. 9350. p. 476-484 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9350).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    38 Citations (Scopus)
  • 2008

    Symmetric log-domain diffeomorphic registration: A demons-based approach

    Vercauteren, T., Pennec, X., Perchant, A. & Ayache, N., 1 Dec 2008, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008 - 11th International Conference, Proceedings. PART 1 ed. Vol. 5241 LNCS. p. 754-761 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5241 LNCS, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    307 Citations (Scopus)
  • 2007

    Non-parametric diffeomorphic image registration with the demons algorithm

    Vercauteren, T., Pennec, X., Perchant, A. & Ayache, N., 1 Dec 2007, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007 - 10th International Conference, Proceedings. PART 2 ed. Vol. 4792 LNCS. p. 319-326 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4792 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference paper › peer-review

    336 Citations (Scopus)