Search results

• 2024

  Global compositional and functional states of the human gut microbiome in health and disease

  Lee, S., Portlock, T., Le Chatelier, E., Garcia-Guevara, F., Clasen, F., Oñate, F. P., Pons, N., Begum, N., Harzandi, A., Proffitt, C., Rosario, D., Vaga, S., Park, J., von Feilitzen, K., Johansson, F., Zhang, C., Edwards, L. A., Lombard, V., Gauthier, F. & Steves, C. J. & 13 others, Gomez-Cabrero, D., Henrissat, B., Lee, D., Engstrand, L., Shawcross, D. L., Proctor, G., Almeida, M., Nielsen, J., Mardinoglu, A., Moyes, D. L., Ehrlich, S. D., Uhlen, M. & Shoaie, S., 23 Jul 2024, In: Genome Research. 34, 6, p. 967-978 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Disease 100%
  • Gut Microbiome 100%
  • Metagenomics 66%
  • Metagenome 66%
  • Analysis 50%
  1 Citation (Scopus)

• Transient colonizing microbes promote gut dysbiosis and functional impairment

  Lee, S., Meslier, V., Bidkhori, G., Garcia-Guevara, F., Etienne-Mesmin, L., Clasen, F., Park, J., Plaza Oñate, F., Cai, H., Le Chatelier, E., Pons, N., Pereira, M., Seifert, M., Boulund, F., Engstrand, L., Lee, D., Proctor, G., Mardinoglu, A., Blanquet-Diot, S. & Moyes, D. & 4 others, Almeida, M., Ehrlich, S. D., Uhlen, M. & Shoaie, S., 8 Sept 2024, In: npj Biofilms and Microbiomes. 10, 1, p. 80 80.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Metagenomics 100%
  • Gut Microbiome 100%
  • Multi-Omics 50%
  • Metagenome 50%
• 2023

  Systematic diet composition swap in a mouse genome-scale metabolic model reveals determinants of obesogenic diet metabolism in liver cancer

  Clasen, F., Nunes, P. M., Bidkhori, G., Bah, N., Boeing, S., Shoaie, S. & Anastasiou, D., 17 Feb 2023, In: iScience. 26, 2, 106040.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Diet 100%
  • Metabolism 100%
  • Obesogenic Diet 100%
  • Liver Cancer 100%
  • Metabolic Pathway 100%
  3 Citations (Scopus)