An open data ecosystem for cell migration research

Paola Masuzzo; Lennart Martens; Christophe Ampe; Kurt I. Anderson; Joseph Barry; Olivier De Wever; Olivier Debeir; Christine Decaes-Tecker; Helmut Dolznig; Peter Friedl; Cedric Gaggioli; Benjamin Geiger; Ilya G. Goldberg; Elias Horn; Rick Horwitz; Zvi Kam; Sylvia E. Le Dévédec; Danijela Matic Vignjevic; Josh Moore; Jean Christophe Olivo-Marin; Erik Sahai; Susanna A. Sansone; Victoria Sanz-Moreno; Staffan Strömblad; Jason Swedlow; Johannes Textor; Marleen Van Troys; Roman Zantl

doi:10.1016/j.tcb.2014.11.005

An open data ecosystem for cell migration research

Paola Masuzzo, Lennart Martens^*, Christophe Ampe, Kurt I. Anderson, Joseph Barry, Olivier De Wever, Olivier Debeir, Christine Decaes-Tecker, Helmut Dolznig, Peter Friedl, Cedric Gaggioli, Benjamin Geiger, Ilya G. Goldberg, Elias Horn, Rick Horwitz, Zvi Kam, Sylvia E. Le Dévédec, Danijela Matic Vignjevic, Josh Moore, Jean Christophe Olivo-MarinErik Sahai, Susanna A. Sansone, Victoria Sanz-Moreno, Staffan Strömblad, Jason Swedlow, Johannes Textor, Marleen Van Troys, Roman Zantl

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

17 Citations (Scopus)

Abstract

Cell migration research has recently become both a high content and a high throughput field thanks to technological, computational, and methodological advances. Simultaneously, however, urgent bioinformatics needs regarding data management, standardization, and dissemination have emerged. To address these concerns, we propose to establish an open data ecosystem for cell migration research.

Original language	English
Pages (from-to)	55-58
Number of pages	4
Journal	TRENDS IN CELL BIOLOGY
Volume	25
Issue number	2
DOIs	https://doi.org/10.1016/j.tcb.2014.11.005
Publication status	Published - 1 Feb 2015

Keywords

Bioinformatics
Cell migration
Data ecosystem
Meta-analysis
Standardization

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10.1016/j.tcb.2014.11.005

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Masuzzo, P., Martens, L., Ampe, C., Anderson, K. I., Barry, J., De Wever, O., Debeir, O., Decaes-Tecker, C., Dolznig, H., Friedl, P., Gaggioli, C., Geiger, B., Goldberg, I. G., Horn, E., Horwitz, R., Kam, Z., Le Dévédec, S. E., Vignjevic, D. M., Moore, J., ... Zantl, R. (2015). An open data ecosystem for cell migration research. TRENDS IN CELL BIOLOGY, 25(2), 55-58. https://doi.org/10.1016/j.tcb.2014.11.005

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abstract = "Cell migration research has recently become both a high content and a high throughput field thanks to technological, computational, and methodological advances. Simultaneously, however, urgent bioinformatics needs regarding data management, standardization, and dissemination have emerged. To address these concerns, we propose to establish an open data ecosystem for cell migration research.",

keywords = "Bioinformatics, Cell migration, Data ecosystem, Meta-analysis, Standardization",

author = "Paola Masuzzo and Lennart Martens and Christophe Ampe and Anderson, {Kurt I.} and Joseph Barry and {De Wever}, Olivier and Olivier Debeir and Christine Decaes-Tecker and Helmut Dolznig and Peter Friedl and Cedric Gaggioli and Benjamin Geiger and Goldberg, {Ilya G.} and Elias Horn and Rick Horwitz and Zvi Kam and {Le D{\'e}v{\'e}dec}, {Sylvia E.} and Vignjevic, {Danijela Matic} and Josh Moore and Olivo-Marin, {Jean Christophe} and Erik Sahai and Sansone, {Susanna A.} and Victoria Sanz-Moreno and Staffan Str{\"o}mblad and Jason Swedlow and Johannes Textor and {Van Troys}, Marleen and Roman Zantl",

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Masuzzo, P, Martens, L, Ampe, C, Anderson, KI, Barry, J, De Wever, O, Debeir, O, Decaes-Tecker, C, Dolznig, H, Friedl, P, Gaggioli, C, Geiger, B, Goldberg, IG, Horn, E, Horwitz, R, Kam, Z, Le Dévédec, SE, Vignjevic, DM, Moore, J, Olivo-Marin, JC, Sahai, E, Sansone, SA, Sanz-Moreno, V, Strömblad, S, Swedlow, J, Textor, J, Van Troys, M & Zantl, R 2015, 'An open data ecosystem for cell migration research', TRENDS IN CELL BIOLOGY, vol. 25, no. 2, pp. 55-58. https://doi.org/10.1016/j.tcb.2014.11.005

TY - JOUR

T1 - An open data ecosystem for cell migration research

AU - Masuzzo, Paola

AU - Martens, Lennart

AU - Ampe, Christophe

AU - Anderson, Kurt I.

AU - Barry, Joseph

AU - De Wever, Olivier

AU - Debeir, Olivier

AU - Decaes-Tecker, Christine

AU - Dolznig, Helmut

AU - Friedl, Peter

AU - Gaggioli, Cedric

AU - Geiger, Benjamin

AU - Goldberg, Ilya G.

AU - Horn, Elias

AU - Horwitz, Rick

AU - Kam, Zvi

AU - Le Dévédec, Sylvia E.

AU - Vignjevic, Danijela Matic

AU - Moore, Josh

AU - Olivo-Marin, Jean Christophe

AU - Sahai, Erik

AU - Sansone, Susanna A.

AU - Sanz-Moreno, Victoria

AU - Strömblad, Staffan

AU - Swedlow, Jason

AU - Textor, Johannes

AU - Van Troys, Marleen

AU - Zantl, Roman

PY - 2015/2/1

Y1 - 2015/2/1

N2 - Cell migration research has recently become both a high content and a high throughput field thanks to technological, computational, and methodological advances. Simultaneously, however, urgent bioinformatics needs regarding data management, standardization, and dissemination have emerged. To address these concerns, we propose to establish an open data ecosystem for cell migration research.

AB - Cell migration research has recently become both a high content and a high throughput field thanks to technological, computational, and methodological advances. Simultaneously, however, urgent bioinformatics needs regarding data management, standardization, and dissemination have emerged. To address these concerns, we propose to establish an open data ecosystem for cell migration research.

KW - Bioinformatics

KW - Cell migration

KW - Data ecosystem

KW - Meta-analysis

KW - Standardization

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DO - 10.1016/j.tcb.2014.11.005

M3 - Article

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SP - 55

EP - 58

JO - TRENDS IN CELL BIOLOGY

JF - TRENDS IN CELL BIOLOGY

IS - 2

ER -

An open data ecosystem for cell migration research

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Keywords

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