TY - JOUR
T1 - Directly modelling population dynamics in the South American Arid Diagonal using 14C dates
T2 - CPL modelling population SAAD dynamics
AU - Timpson, Adrian
AU - Barberena, Ramiro
AU - Thomas, Mark G.
AU - Méndez, César
AU - Manning, Katie
N1 - Publisher Copyright:
© 2020 The Author(s).
PY - 2021/1/18
Y1 - 2021/1/18
N2 - Large anthropogenic 14 C datasets are widely used to generate summed probability distributions (SPDs) as a proxy for past human population levels. However, SPDs are a poor proxy when datasets are small, bearing little relationship to true population dynamics. Instead, more robust inferences can be achieved by directly modelling the population and assessing the model likelihood given the data. We introduce the R package ADMUR which uses a continuous piecewise linear (CPL) model of population change, calculates the model likelihood given a 14 C dataset, estimates credible intervals using Markov chain Monte Carlo, applies a goodness-of-fit test, and uses the Schwarz Criterion to compare CPL models. We demonstrate the efficacy of this method using toy data, showing that spurious dynamics are avoided when sample sizes are small, and true population dynamics are recovered as sample sizes increase. Finally, we use an improved 14 C dataset for the South American Arid Diagonal to compare CPL modelling to current simulation methods, and identify three Holocene phases when population trajectory estimates changed from rapid initial growth of 4.15% per generation to a decline of 0.05% per generation between 10 821 and 7055 yr BP, then gently grew at 0.58% per generation until 2500 yr BP. This article is part of the theme issue 'Cross-disciplinary approaches to prehistoric demography'.
AB - Large anthropogenic 14 C datasets are widely used to generate summed probability distributions (SPDs) as a proxy for past human population levels. However, SPDs are a poor proxy when datasets are small, bearing little relationship to true population dynamics. Instead, more robust inferences can be achieved by directly modelling the population and assessing the model likelihood given the data. We introduce the R package ADMUR which uses a continuous piecewise linear (CPL) model of population change, calculates the model likelihood given a 14 C dataset, estimates credible intervals using Markov chain Monte Carlo, applies a goodness-of-fit test, and uses the Schwarz Criterion to compare CPL models. We demonstrate the efficacy of this method using toy data, showing that spurious dynamics are avoided when sample sizes are small, and true population dynamics are recovered as sample sizes increase. Finally, we use an improved 14 C dataset for the South American Arid Diagonal to compare CPL modelling to current simulation methods, and identify three Holocene phases when population trajectory estimates changed from rapid initial growth of 4.15% per generation to a decline of 0.05% per generation between 10 821 and 7055 yr BP, then gently grew at 0.58% per generation until 2500 yr BP. This article is part of the theme issue 'Cross-disciplinary approaches to prehistoric demography'.
KW - ADMUR
KW - continuous piecewise linear model
KW - Holocene population dynamics
KW - radiocarbon
KW - South American Arid Diagonal
KW - summed probability distribution
UR - http://www.scopus.com/inward/record.url?scp=85097037003&partnerID=8YFLogxK
U2 - 10.1098/rstb.2019.0723
DO - 10.1098/rstb.2019.0723
M3 - Article
C2 - 33250032
AN - SCOPUS:85097037003
SN - 0962-8436
VL - 376
JO - Philosophical Transactions of the Royal Society B: Biological Sciences
JF - Philosophical Transactions of the Royal Society B: Biological Sciences
IS - 1816
M1 - 20190723
ER -