TY - CHAP
T1 - Simplifying Disease Staging Models into a Single Anatomical Axis - A Case Study of Aortic Coarctation In-utero
AU - Hermida, Uxio
AU - Poppel, Milou P.M.van
AU - Stojanovski, David
AU - Lloyd, David F.A.
AU - Steinweg, Johannes K.
AU - Vigneswaran, Trisha V.
AU - Simpson, John M.
AU - Razavi, Reza
AU - Vecchi, Adelaide De
AU - Pushparajah, Kuberan
AU - Lamata, Pablo
N1 - Publisher Copyright:
© 2022, The Author(s), under exclusive license to Springer Nature Switzerland AG.
PY - 2022
Y1 - 2022
N2 - Statistical shape modelling and classification methods are used to study characteristic disease phenotypes, to derive novel shape biomarkers, and to extract insights into disease mechanisms. Linear classification models are commonly chosen due to their ability to provide a single score, as well as easy-to-interpret characteristic shapes. In disease staging models, a multi-class problem is generally set. Then, one would expect that the set of linear models comparing any pair of classes will lead to the same unique anatomical axis capturing characteristic shapes for each group in the disease spectrum, and a unique mechanistic interpretation. In this work, we aim to explore the validity of this assumption and assess the confidence in simplifying both mechanistic interpretations and clinical classification performance into a single axis in disease staging models. To do so, we used a statistical shape model of fetal great arteries in cases with suspected coarctation of the aorta. Data included control, false positive and confirmed coarctation cases, representative of three categories of developmental impairment from the disease spectrum. Principal component analysis combined with a fisher linear discriminant analysis was used to explore phenotypes associated with each group and classification performance. A combination of classification overfitting, a co-linearity index between axes, and the three-dimensional extreme phenotypes provided useful information for simplification into a single anatomical axis. Careful consideration should be taken in disease progression studies where either overfitting or co-linearity are compromised, as the simplification with a single anatomical axis might lead to the inference of misleading mechanisms associated with disease.
AB - Statistical shape modelling and classification methods are used to study characteristic disease phenotypes, to derive novel shape biomarkers, and to extract insights into disease mechanisms. Linear classification models are commonly chosen due to their ability to provide a single score, as well as easy-to-interpret characteristic shapes. In disease staging models, a multi-class problem is generally set. Then, one would expect that the set of linear models comparing any pair of classes will lead to the same unique anatomical axis capturing characteristic shapes for each group in the disease spectrum, and a unique mechanistic interpretation. In this work, we aim to explore the validity of this assumption and assess the confidence in simplifying both mechanistic interpretations and clinical classification performance into a single axis in disease staging models. To do so, we used a statistical shape model of fetal great arteries in cases with suspected coarctation of the aorta. Data included control, false positive and confirmed coarctation cases, representative of three categories of developmental impairment from the disease spectrum. Principal component analysis combined with a fisher linear discriminant analysis was used to explore phenotypes associated with each group and classification performance. A combination of classification overfitting, a co-linearity index between axes, and the three-dimensional extreme phenotypes provided useful information for simplification into a single anatomical axis. Careful consideration should be taken in disease progression studies where either overfitting or co-linearity are compromised, as the simplification with a single anatomical axis might lead to the inference of misleading mechanisms associated with disease.
KW - Clinical biomarker
KW - Computational anatomy
KW - Discriminant analysis
KW - Remodelling
UR - http://www.scopus.com/inward/record.url?scp=85148007801&partnerID=8YFLogxK
U2 - 10.1007/978-3-031-23443-9_25
DO - 10.1007/978-3-031-23443-9_25
M3 - Conference paper
AN - SCOPUS:85148007801
SN - 9783031234422
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 269
EP - 279
BT - Statistical Atlases and Computational Models of the Heart. Regular and CMRxMotion Challenge Papers - 13th International Workshop, STACOM 2022, Held in Conjunction with MICCAI 2022, Revised Selected Papers
A2 - Camara, Oscar
A2 - Puyol-Antón, Esther
A2 - Suinesiaputra, Avan
A2 - Young, Alistair
A2 - Qin, Chen
A2 - Sermesant, Maxime
A2 - Wang, Shuo
PB - Springer Science and Business Media Deutschland GmbH
T2 - 13th International Workshop on Statistical Atlases and Computational Models of the Heart, STACOM 2022, held in conjunction with the 25th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2022
Y2 - 18 September 2022 through 18 September 2022
ER -