Synthesis, Anticholinesterase Activity and Molecular Modeling Studies of Novel Carvacrol Substituted Amide Derivatives

Belma Zengin Kurt, Serdar Durdagi, Gulsen Celebi, Ramin Ekhteiari Salmas, Fatih Sonmez

Research output: Contribution to journalArticlepeer-review

10 Citations (Scopus)

Abstract

In the present study, 23 novel carvacrol derivatives involving the amide moiety as a linker between the alkyl chains and/or the heterocycle nucleus were synthesized and tested in vitro as acetylcholinesterase (AChE) and butyrylcholinesterase (BuChE) inhibitors. 2-(5-isopropyl-2-methylphenoxy)-N-(quinolin-8-yl)acetamide (5v) revealed the highest inhibition properties against AChE and BuChE with the IC50 values of 1.93 µM and 0.05 µM, respectively. The blood-brain barrier (BBB) permeability of the potent inhibitor (5v) was also assessed by the widely used parallel artificial membrane permeability assay (PAMPA-BBB). The results showed that 5v is capable of crossing the BBB. Pharmacokinetic and toxicity profiles of the studied molecules predictions were investigated by MetaCore/MetaDrug platform. Bioactive conformations of the synthesized molecules, their predicted binding energies as well as structural and dynamical profiles of molecules at the binding pockets of AChE and BuChE targets were also investigated using different docking algorithms and molecular dynamics (MD) simulations.

Original languageEnglish
Pages (from-to)1-28
Number of pages28
JournalJournal of Biomolecular Structure and Dynamics
Early online date5 Mar 2019
DOIs
Publication statusE-pub ahead of print - 5 Mar 2019

Keywords

  • Acetylcholinesterase
  • Alzheimer’s disease
  • butyrylcholinesterase
  • carvacrol
  • molecular docking
  • molecular dynamics (MD) simulations

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