Ensembl 2011

Paul Flicek; M Ridwan Amode; Daniel Barrell; Kathryn Beal; Simon Brent; Yuan Chen; Peter Clapham; Guy Coates; Susan Fairley; Stephen Fitzgerald; Leo Gordon; Maurice Hendrix; Thibaut Hourlier; Nathan Johnson; Andreas Kähäri; Damian Keefe; Stephen Keenan; Rhoda Kinsella; Felix Kokocinski; Eugene Kulesha; Pontus Larsson; Ian Longden; William McLaren; Bert Overduin; Bethan Pritchard; Harpreet Singh Riat; Daniel Rios; Graham R S Ritchie; Magali Ruffier; Michael Schuster; Daniel Sobral; Giulietta Spudich; Y Amy Tang; Stephen Trevanion; Jana Vandrovcova; Albert J Vilella; Simon White; Steven P Wilder; Amonida Zadissa; Jorge Zamora; Bronwen L Aken; Ewan Birney; Fiona Cunningham; Ian Dunham; Richard Durbin; Xosé M Fernández-Suarez; Javier Herrero; Tim J P Hubbard; Anne Parker; Glenn Proctor; Jan Vogel; Stephen M J Searle

doi:10.1093/nar/gkq1064

Ensembl 2011

Paul Flicek, M Ridwan Amode, Daniel Barrell, Kathryn Beal, Simon Brent, Yuan Chen, Peter Clapham, Guy Coates, Susan Fairley, Stephen Fitzgerald, Leo Gordon, Maurice Hendrix, Thibaut Hourlier, Nathan Johnson, Andreas Kähäri, Damian Keefe, Stephen Keenan, Rhoda Kinsella, Felix Kokocinski, Eugene KuleshaPontus Larsson, Ian Longden, William McLaren, Bert Overduin, Bethan Pritchard, Harpreet Singh Riat, Daniel Rios, Graham R S Ritchie, Magali Ruffier, Michael Schuster, Daniel Sobral, Giulietta Spudich, Y Amy Tang, Stephen Trevanion, Jana Vandrovcova, Albert J Vilella, Simon White, Steven P Wilder, Amonida Zadissa, Jorge Zamora, Bronwen L Aken, Ewan Birney, Fiona Cunningham, Ian Dunham, Richard Durbin, Xosé M Fernández-Suarez, Javier Herrero, Tim J P Hubbard, Anne Parker, Glenn Proctor, Jan Vogel, Stephen M J Searle

Medical & Molecular Genetics

European Molecular Biology Laboratory Cambridge

Research output: Contribution to journal › Article › peer-review

597 Citations (Scopus)

Abstract

The Ensembl project (http://www.ensembl.org) seeks to enable genomic science by providing high quality, integrated annotation on chordate and selected eukaryotic genomes within a consistent and accessible infrastructure. All supported species include comprehensive, evidence-based gene annotations and a selected set of genomes includes additional data focused on variation, comparative, evolutionary, functional and regulatory annotation. The most advanced resources are provided for key species including human, mouse, rat and zebrafish reflecting the popularity and importance of these species in biomedical research. As of Ensembl release 59 (August 2010), 56 species are supported of which 5 have been added in the past year. Since our previous report, we have substantially improved the presentation and integration of both data of disease relevance and the regulatory state of different cell types.

Original language	English
Article number	N/A
Pages (from-to)	D800-D806
Number of pages	7
Journal	Nucleic Acids Research
Volume	39
Issue number	Suppl 1 (Database issue)
DOIs	https://doi.org/10.1093/nar/gkq1064
Publication status	Published - Jan 2011

Keywords

Animals
Databases, Genetic
Genetic Variation
Genomics
Humans
Mice
Molecular Sequence Annotation
Rats
Regulatory Sequences, Nucleic Acid
Software
Zebrafish

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

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10.1093/nar/gkq1064

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Flicek, P., Amode, M. R., Barrell, D., Beal, K., Brent, S., Chen, Y., Clapham, P., Coates, G., Fairley, S., Fitzgerald, S., Gordon, L., Hendrix, M., Hourlier, T., Johnson, N., Kähäri, A., Keefe, D., Keenan, S., Kinsella, R., Kokocinski, F., ... Searle, S. M. J. (2011). Ensembl 2011. Nucleic Acids Research, 39(Suppl 1 (Database issue)), D800-D806. Article N/A. https://doi.org/10.1093/nar/gkq1064

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Flicek, P, Amode, MR, Barrell, D, Beal, K, Brent, S, Chen, Y, Clapham, P, Coates, G, Fairley, S, Fitzgerald, S, Gordon, L, Hendrix, M, Hourlier, T, Johnson, N, Kähäri, A, Keefe, D, Keenan, S, Kinsella, R, Kokocinski, F, Kulesha, E, Larsson, P, Longden, I, McLaren, W, Overduin, B, Pritchard, B, Riat, HS, Rios, D, Ritchie, GRS, Ruffier, M, Schuster, M, Sobral, D, Spudich, G, Tang, YA, Trevanion, S, Vandrovcova, J, Vilella, AJ, White, S, Wilder, SP, Zadissa, A, Zamora, J, Aken, BL, Birney, E, Cunningham, F, Dunham, I, Durbin, R, Fernández-Suarez, XM, Herrero, J, Hubbard, TJP, Parker, A, Proctor, G, Vogel, J & Searle, SMJ 2011, 'Ensembl 2011', Nucleic Acids Research, vol. 39, no. Suppl 1 (Database issue), N/A, pp. D800-D806. https://doi.org/10.1093/nar/gkq1064

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AU - Flicek, Paul

AU - Amode, M Ridwan

AU - Barrell, Daniel

AU - Beal, Kathryn

AU - Brent, Simon

AU - Chen, Yuan

AU - Clapham, Peter

AU - Coates, Guy

AU - Fairley, Susan

AU - Fitzgerald, Stephen

AU - Gordon, Leo

AU - Hendrix, Maurice

AU - Hourlier, Thibaut

AU - Johnson, Nathan

AU - Kähäri, Andreas

AU - Keefe, Damian

AU - Keenan, Stephen

AU - Kinsella, Rhoda

AU - Kokocinski, Felix

AU - Kulesha, Eugene

AU - Larsson, Pontus

AU - Longden, Ian

AU - McLaren, William

AU - Overduin, Bert

AU - Pritchard, Bethan

AU - Riat, Harpreet Singh

AU - Rios, Daniel

AU - Ritchie, Graham R S

AU - Ruffier, Magali

AU - Schuster, Michael

AU - Sobral, Daniel

AU - Spudich, Giulietta

AU - Tang, Y Amy

AU - Trevanion, Stephen

AU - Vandrovcova, Jana

AU - Vilella, Albert J

AU - White, Simon

AU - Wilder, Steven P

AU - Zadissa, Amonida

AU - Zamora, Jorge

AU - Aken, Bronwen L

AU - Birney, Ewan

AU - Cunningham, Fiona

AU - Dunham, Ian

AU - Durbin, Richard

AU - Fernández-Suarez, Xosé M

AU - Herrero, Javier

AU - Hubbard, Tim J P

AU - Parker, Anne

AU - Proctor, Glenn

AU - Vogel, Jan

AU - Searle, Stephen M J

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KW - Animals

KW - Databases, Genetic

KW - Genetic Variation

KW - Genomics

KW - Humans

KW - Mice

KW - Molecular Sequence Annotation

KW - Rats

KW - Regulatory Sequences, Nucleic Acid

KW - Software

KW - Zebrafish

U2 - 10.1093/nar/gkq1064

DO - 10.1093/nar/gkq1064

M3 - Article

C2 - 21045057

SN - 0305-1048

VL - 39

SP - D800-D806

JO - Nucleic Acids Research

JF - Nucleic Acids Research

IS - Suppl 1 (Database issue)

M1 - N/A

ER -

Ensembl 2011

Abstract

Keywords

UN SDGs

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